Morgan Taylor Claude Fable 5 commited on
Commit
83880a1
·
1 Parent(s): 247f25a

Marker-style experimental figure; cite PIVtools only

Browse files

- piv_vs_hwa_paper.py: PIV profiles drawn as synthetic-style markers
(ensemble = squares, instantaneous passes = circles/triangles), hot
wire as the solid reference line, matching paper_figures.py.
- README: citation section asks for the PIVtools paper only; JHTDB
provenance retained in the generation and license sections.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

Files changed (2) hide show
  1. README.md +4 -20
  2. scripts/piv_vs_hwa_paper.py +20 -9
README.md CHANGED
@@ -331,7 +331,7 @@ repository's git history.
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  ## Citation
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- If you use this dataset, please cite both the PIVtools paper and the underlying DNS source.
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  ```bibtex
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  @article{taylor_pivtools,
@@ -340,28 +340,12 @@ If you use this dataset, please cite both the PIVtools paper and the underlying
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  journal={SoftwareX},
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  note={submitted}
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  }
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-
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- @article{lee2015direct,
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- title={Direct numerical simulation of turbulent channel flow up to Re_tau = 5200},
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- author={Lee, M. and Moser, R.D.},
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- journal={J. Fluid Mech.},
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- year={2015}
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- }
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-
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- @article{li2008public,
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- title={A public turbulence database cluster and applications to study Lagrangian evolution of velocity increments in turbulence},
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- author={Li, Y. and others},
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- journal={J. Turbulence},
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- year={2008}
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- }
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  ```
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- DNS reference data is from the **Johns Hopkins Turbulence Database** (JHTDB).
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-
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  ## License
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  CC-BY-4.0 — free to use, modify, and redistribute with attribution to the PIVtools paper.
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- The DNS ground truth is derived from publicly accessible JHTDB data and is redistributed
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- here under the same permissive terms; consult the JHTDB usage policy
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- (http://turbulence.pha.jhu.edu) for their citation requirements.
 
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  ## Citation
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+ If you use this dataset, please cite the PIVtools paper.
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  ```bibtex
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  @article{taylor_pivtools,
 
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  journal={SoftwareX},
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  note={submitted}
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  }
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  ```
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  ## License
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  CC-BY-4.0 — free to use, modify, and redistribute with attribution to the PIVtools paper.
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+ The DNS ground truth is derived from publicly accessible Johns Hopkins Turbulence
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+ Database data (http://turbulence.pha.jhu.edu) and is redistributed here under the
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+ same permissive terms.
scripts/piv_vs_hwa_paper.py CHANGED
@@ -43,6 +43,11 @@ ENS_COLOR = "#D55E00" # ensemble (orange-red)
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  INST_COLOR = "#0072B2" # instantaneous (blue)
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  HW_COLOR = "k" # hot wire
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  # --------------------------------------------------------------------------- #
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  # Profile helpers (central-column median about the station, wall-frame y)
@@ -203,27 +208,33 @@ def main():
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  fig, ax = plt.subplots(1, 2, figsize=(14, 6))
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  a0 = ax[0]
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- a0.plot(yp_hw, Up_hw, "-o", color=HW_COLOR, ms=5, lw=2, label="Hot wire")
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- a0.plot(ypE, UpE, "-", color=ENS_COLOR, lw=2.4, label=ens_lbl)
 
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  for k, (lbl, ypI, UpI, _) in enumerate(inst_profiles):
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- a0.plot(ypI, UpI, "-", color=inst_colors[k % len(inst_colors)], lw=2.4,
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- label=f"PIVtools inst. {lbl}")
 
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  a0.set_xscale("log"); a0.set_xlim(8, 8000); a0.set_ylim(0, 30)
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  a0.grid(True, which="both", alpha=0.3)
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  a0.set_xlabel(r"$y^+$"); a0.set_ylabel(r"$U^+$"); a0.set_title("Mean velocity")
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  a0.legend(loc="upper left")
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  a1 = ax[1]
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- a1.plot(yp_hw, uup_hw, "-o", color=HW_COLOR, ms=5, lw=2, label="Hot wire (uncorrected)")
 
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  if a.ens_stress_lowess and a.ens_stress_lowess > 0:
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  a1.plot(ypE, uupE, "-", color=ENS_COLOR, lw=0.7, alpha=0.22)
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  s_yp, s_v = log_smooth(ypE, uupE, sigma_decades=a.ens_stress_lowess)
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- a1.plot(s_yp, s_v, "-", color=ENS_COLOR, lw=2.6, label=ens_lbl)
 
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  else:
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- a1.plot(ypE, uupE, "-", color=ENS_COLOR, lw=2.4, label=ens_lbl)
 
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  for k, (lbl, ypI, _, uupI) in enumerate(inst_profiles):
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- a1.plot(ypI, uupI, "-", color=inst_colors[k % len(inst_colors)], lw=2.4,
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- label=f"PIVtools inst. {lbl}")
 
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  a1.set_xscale("log"); a1.set_xlim(8, 8000)
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  a1.set_ylim(0, max(12, np.nanmax(uup_hw) * 1.15))
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  a1.grid(True, which="both", alpha=0.3)
 
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  INST_COLOR = "#0072B2" # instantaneous (blue)
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  HW_COLOR = "k" # hot wire
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+ # Marker convention matches paper_figures.py (synthetic cases):
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+ # reference = solid black line, each PIV method = its own marker, no line.
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+ ENS_MARKER = "s"
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+ INST_MARKERS = ["o", "^", "D"] # one per instantaneous pass
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+
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  # --------------------------------------------------------------------------- #
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  # Profile helpers (central-column median about the station, wall-frame y)
 
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  fig, ax = plt.subplots(1, 2, figsize=(14, 6))
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  a0 = ax[0]
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+ a0.plot(yp_hw, Up_hw, "-", color=HW_COLOR, lw=2, label="Hot wire", zorder=10)
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+ a0.plot(ypE, UpE, ENS_MARKER, color=ENS_COLOR, ms=4.5, alpha=0.7,
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+ linestyle="none", label=ens_lbl, zorder=5)
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  for k, (lbl, ypI, UpI, _) in enumerate(inst_profiles):
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+ a0.plot(ypI, UpI, INST_MARKERS[k % len(INST_MARKERS)],
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+ color=inst_colors[k % len(inst_colors)], ms=4.5, alpha=0.7,
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+ linestyle="none", label=f"PIVtools inst. {lbl}", zorder=4)
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  a0.set_xscale("log"); a0.set_xlim(8, 8000); a0.set_ylim(0, 30)
219
  a0.grid(True, which="both", alpha=0.3)
220
  a0.set_xlabel(r"$y^+$"); a0.set_ylabel(r"$U^+$"); a0.set_title("Mean velocity")
221
  a0.legend(loc="upper left")
222
 
223
  a1 = ax[1]
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+ a1.plot(yp_hw, uup_hw, "-", color=HW_COLOR, lw=2,
225
+ label="Hot wire (uncorrected)", zorder=10)
226
  if a.ens_stress_lowess and a.ens_stress_lowess > 0:
227
  a1.plot(ypE, uupE, "-", color=ENS_COLOR, lw=0.7, alpha=0.22)
228
  s_yp, s_v = log_smooth(ypE, uupE, sigma_decades=a.ens_stress_lowess)
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+ a1.plot(s_yp, s_v, ENS_MARKER, color=ENS_COLOR, ms=4.5, alpha=0.7,
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+ linestyle="none", label=ens_lbl, zorder=5)
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  else:
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+ a1.plot(ypE, uupE, ENS_MARKER, color=ENS_COLOR, ms=4.5, alpha=0.7,
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+ linestyle="none", label=ens_lbl, zorder=5)
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  for k, (lbl, ypI, _, uupI) in enumerate(inst_profiles):
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+ a1.plot(ypI, uupI, INST_MARKERS[k % len(INST_MARKERS)],
236
+ color=inst_colors[k % len(inst_colors)], ms=4.5, alpha=0.7,
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+ linestyle="none", label=f"PIVtools inst. {lbl}", zorder=4)
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  a1.set_xscale("log"); a1.set_xlim(8, 8000)
239
  a1.set_ylim(0, max(12, np.nanmax(uup_hw) * 1.15))
240
  a1.grid(True, which="both", alpha=0.3)